Skip to contents

generic geneSiteTable function definition

Usage

geneSiteTable(object, gene_bed, genes, eps, ...)

Arguments

object

the Splice object

gene_bed

The gene bed annotation, should include the gene name and the gene strand.

genes

The target genes to generate meta sites, default for all genes

eps

The threshold for two sites to be merged

...

other possible parameters for genes_groups_GLRT.base