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generic gene_exons_table function for Splice object

Usage

# S4 method for Splice,list,character
geneSiteTable(object, gene_bed, genes, eps, ...)

Arguments

object

a Splice object

gene_bed

The gene bed annotation, should include the gene name and the gene strand.

genes

The target genes to generate meta sites, default for all genes

eps

The threshold for two sites to be merged

...

parameters for geneSiteTable.base